EDNA Plugin: EDPluginLabelitIndexingv1_1

Name:EDPluginLabelitIndexingv1_1
Project:mxPluginExec
Path:mxPluginExec/plugins/EDPluginGroupLabelit-v1.1/plugins/EDPluginLabelitIndexingv1_1.py
Author:Olof Svensson, Marie-Francoise Incardona, Karl Levik
Date:20120712
Copyright:European Synchrotron Radiation Facility, Grenoble, France
License:LGPLv3+
Module doc:
Class doc:This plugin runs the labelit.screen command for indexing reference images.
If the labelit.sceen command is successful, the labelit.mosflm_scripts command is run
for generating the orientation matrices (in MOSFLM format).
The plugin requires that the path to the Labelit "setpath.sh" script is configured
using the configuration keyword "pathToLabelitSetpathScript".
Datamodels: XSDataString
targetNamespace "http://www.edna-site.org"

package XSDataCommon {
    package CommonBasicTypes {

        complex type XSData {
        }

        complex type XSDataBoolean extends XSData {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
            value : boolean
        }

        complex type XSDataDate extends XSDataString {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

        complex type XSDataDouble extends XSData {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
            value : double
        }

        complex type XSDataFloat extends XSData {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
            value : double
        }

        complex type XSDataInteger extends XSData {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
            value : integer
        }

        complex type XSDataString extends XSData {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
            value : string
        }

    }

    package CommonComplexTypes {

        complex type XSDataArray extends XSData {
            "md5 checksum has to be calculated on the decoded data, not the encoded one. Default encoding is \"base64\" default byte order is \"little-endian\" (intel) not \"big-endian\" (java)"
            coding : XSDataString optional
            data : string
            dtype : string
            md5sum : XSDataString optional
            shape : integer []
            size : integer
        }

        complex type XSDataDictionary {
            keyValuePair : XSDataKeyValuePair [] optional
        }

        complex type XSDataFile extends XSData {
            "These objects use the simple objects described above to create useful structures for the rest for the data model."
            path : XSDataString
        }

        complex type XSDataImage extends XSDataFile {
            "These objects use the simple objects described above to create useful structures for the rest for the data model."
            date : XSDataString optional
            number : XSDataInteger optional
        }

        complex type XSDataImageExt extends XSDataImage {
            "Represents an image that can either be in a file (path), either inside the XML (array) or as a reference for EDShare (shared) "
            array : XSDataArray optional
            exposureTime : XSDataTime optional
            shared : XSDataString optional
        }

        complex type XSDataKeyValuePair {
            key : XSDataString
            value : XSDataString
        }

        complex type XSDataSize extends XSData {
            "These objects use the simple objects described above to create useful structures for the rest for the data model."
            x : XSDataLength
            y : XSDataLength
            z : XSDataLength
        }

    }

    package CommonConfiguration {

        complex type XSConfiguration {
            XSImportConfiguration : XSImportConfiguration [] optional
            XSPluginList : XSPluginList optional
        }

        complex type XSImportConfiguration {
            directory : string optional
            name : string
        }

        complex type XSParamItem {
            name : string
            value : string
        }

        complex type XSParamList {
            XSParamItem : XSParamItem []
        }

        complex type XSPluginItem {
            XSParamList : XSParamList optional
            name : string
        }

        complex type XSPluginList {
            XSPluginItem : XSPluginItem []
        }

    }

    package CommonInputAndResult {

        complex type XSDataExecutionInfo {
            "This class contains details of the execution of a particular plugin."
            baseDirectory : XSDataFile
            configuration : XSConfiguration
            executionTime : XSDataTime
            pluginName : XSDataString
            startOfExecution : XSDataDate
            systeminfo : XSDataSysteminfo
            workingDirectory : XSDataFile
        }

        complex type XSDataInput extends XSData {
            "All plugin input and result classes should be derived from these two classes."
            configuration : XSConfiguration
            optional
        }

        complex type XSDataMessage extends XSData {
            "This message class is used (amongst other messages) for warning and error messages."
            debuginfo : XSDataString
            level : XSDataString
            text : XSDataString
            ^type : XSDataString
        }

        complex type XSDataResult extends XSData {
            "All plugin input and result classes should be derived from these two classes."
            status : XSDataStatus optional
        }

        complex type XSDataStatus extends XSData {
            "This class contains all data related to the execution of a plugin."
            executionInfo : XSDataExecutionInfo optional
            executiveSummary : XSDataString optional
            isSuccess : XSDataBoolean
            message : XSDataMessage optional
        }

        complex type XSDataSysteminfo extends XSData {
            "This class contains information about the system executing the plugin."
            compiler : XSDataString
            hostIP : XSDataString
            hostName : XSDataString
            operatingSystem : XSDataString
            operatingSystemType : XSDataString
            userName : XSDataString
            virtualMachine : XSDataString
        }

    }

    package CommonLinearAlgebra {

        complex type XSDataMatrix extends XSDataMatrixDouble {
            "XSDataMatrix is deprecated and should be replaced with XSDataMatrixDouble."
        }

        complex type XSDataMatrixDouble extends XSData {
            "These are compound object used for linear algebra operations."
            m11 : double
            m12 : double
            m13 : double
            m21 : double
            m22 : double
            m23 : double
            m31 : double
            m32 : double
            m33 : double
        }

        complex type XSDataMatrixInteger extends XSData {
            "These are compound object used for linear algebra operations."
            m11 : integer
            m12 : integer
            m13 : integer
            m21 : integer
            m22 : integer
            m23 : integer
            m31 : integer
            m32 : integer
            m33 : integer
        }

        complex type XSDataUnitVector extends XSDataVectorDouble {
            "<>\r\n{abs(v1**2.0 + v3**2.0-1.0) < epsilon}"
        }

        complex type XSDataVectorDouble extends XSData {
            "These are compound object used for linear algebra operations."
            v1 : double
            v2 : double
            v3 : double
        }

        complex type XSDataVectorInteger extends XSData {
            "These are compound object used for linear algebra operations."
            v1 : integer
            v2 : integer
            v3 : integer
        }

    }

    package CommonTypesWithUnits {

        complex type XSDataAbsorbedDoseRate extends XSDataDoubleWithUnit {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

        complex type XSDataAngle extends XSDataDisplacement {
        }

        complex type XSDataAngularSpeed extends XSDataDoubleWithUnit {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

        complex type XSDataDisplacement extends XSDataDoubleWithUnit {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

        complex type XSDataDoubleWithUnit extends XSDataDouble {
            error : XSDataDouble optional
            unit : XSDataString optional
        }

        complex type XSDataFlux extends XSDataDoubleWithUnit {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

        complex type XSDataLength extends XSDataDoubleWithUnit {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

        complex type XSDataLinearDisplacement extends XSDataDisplacement {
        }

        complex type XSDataRotation extends XSData {
            "These are compound object used for linear algebra operations."
            q0 : double
            q1 : double
            q2 : double
            q3 : double
        }

        complex type XSDataSpeed extends XSDataDoubleWithUnit {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

        complex type XSDataTime extends XSDataDoubleWithUnit {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

        complex type XSDataWavelength extends XSDataDoubleWithUnit {
            "These simple objects that use built-in types are basically aimed to be used by the rest of the data model objects."
        }

    }

}
Datamodels: XSDataString
Datamodels: XSDataString
Datamodels: XSDataString
Datamodels: XSDataString
Datamodels: XSDataString
Datamodels: XSDataString