Generated by Cython 0.19 on Thu Jul 11 09:13:37 2013
Raw output: histogram.c
1: #!/usr/bin/env python
/* "histogram.pyx":1 * #!/usr/bin/env python #<<<<<<<<<<<<<<* # -*- coding: utf-8 -*- * # */ __pyx_t_4 = PyDict_New(); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_4)); if (PyDict_SetItem(__pyx_d, __pyx_n_s____test__, ((PyObject *)__pyx_t_4))<0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0;
2: # -*- coding: utf-8 -*-
3: #
4: # Project: Azimuthal integration
5: # https://forge.epn-campus.eu/projects/azimuthal
6: #
7: # File: "$Id$"
8: #
9: # Copyright (C) European Synchrotron Radiation Facility, Grenoble, France
10: #
11: # Principal author: Jérôme Kieffer (Jerome.Kieffer@ESRF.eu)
12: #
13: # This program is free software: you can redistribute it and/or modify
14: # it under the terms of the GNU General Public License as published by
15: # the Free Software Foundation, either version 3 of the License, or
16: # (at your option) any later version.
17: #
18: # This program is distributed in the hope that it will be useful,
19: # but WITHOUT ANY WARRANTY; without even the implied warranty of
20: # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
21: # GNU General Public License for more details.
22: #
23: # You should have received a copy of the GNU General Public License
24: # along with this program. If not, see <http://www.gnu.org/licenses/>.
25: #
26:
27: __author__ = "Jerome Kieffer"
/* "histogram.pyx":27 * # * * __author__ = "Jerome Kieffer" #<<<<<<<<<<<<<<* __date__ = "20130711" * */ if (PyDict_SetItem(__pyx_d, __pyx_n_s____author__, ((PyObject *)__pyx_kp_s_48))<0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
28: __date__ = "20130711"
/* "histogram.pyx":28 * * __author__ = "Jerome Kieffer" * __date__ = "20130711" #<<<<<<<<<<<<<<* * import cython */ if (PyDict_SetItem(__pyx_d, __pyx_n_s____date__, ((PyObject *)__pyx_kp_s__20130711))<0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 28; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
29:
30: import cython
31: from cython.parallel cimport prange
32: import numpy
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33: cimport numpy
34: import sys
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35:
36: from libc.stdlib cimport free, calloc,malloc
37: from libc.math cimport floor,fabs
38: from openmp cimport omp_set_num_threads, omp_get_max_threads, omp_get_thread_num
39: EPS32 = (1.0 + numpy.finfo(numpy.float32).eps)
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40:
41: @cython.cdivision(True)
42: @cython.boundscheck(False)
43: @cython.wraparound(False)
44: def histogram(numpy.ndarray pos not None, \
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45: numpy.ndarray weights not None, \
46: long bins=100,
47: bin_range=None,
/* "histogram.pyx":47
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* long bins=100,
* bin_range=None, # <<<<<<<<<<<<<<
* pixelSize_in_Pos=None,
* nthread=None,
*/
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48: pixelSize_in_Pos=None,
/* "histogram.pyx":48
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49: nthread=None,
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* """
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50: double dummy=0.0):
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51: """
52: Calculates histogram of pos weighted by weights
53:
54: @param pos: 2Theta array
55: @param weights: array with intensities
56: @param bins: number of output bins
57: @param pixelSize_in_Pos: size of a pixels in 2theta
58: @param nthread: maximum number of thread to use. By default: maximum available.
59: One can also limit this with OMP_NUM_THREADS environment variable
60:
61: @return 2theta, I, weighted histogram, raw histogram
62: """
63:
64: assert pos.size == weights.size
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65: assert bins > 1
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68: cdef double[:] cdata = numpy.ascontiguousarray(weights.ravel(),dtype=numpy.float64)
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69: cdef numpy.ndarray[numpy.float64_t, ndim = 1] outData = numpy.zeros(bins, dtype="float64")
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70: cdef numpy.ndarray[numpy.float64_t, ndim = 1] outCount = numpy.zeros(bins, dtype="float64")
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71: cdef numpy.ndarray[numpy.float64_t, ndim = 1] outMerge = numpy.zeros(bins, dtype="float64")
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72: cdef numpy.ndarray[numpy.float64_t, ndim = 1] outPos = numpy.zeros(bins, dtype="float64")
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73: cdef double bin_edge_min, bin_edge_max
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/* "histogram.pyx":87 * cdef double ffbin = 0.0 * cdef double dInt = 0.0 * cdef double dIntR = 0.0 #<<<<<<<<<<<<<<* cdef double dIntL = 0.0 * cdef double dtmp = 0.0 */ __pyx_v_dIntR = 0.0;
88: cdef double dIntL = 0.0
/* "histogram.pyx":88 * cdef double dInt = 0.0 * cdef double dIntR = 0.0 * cdef double dIntL = 0.0 #<<<<<<<<<<<<<<* cdef double dtmp = 0.0 * cdef double dbin, inv_dbin2 = 0.0 */ __pyx_v_dIntL = 0.0;
89: cdef double dtmp = 0.0
/* "histogram.pyx":89 * cdef double dIntR = 0.0 * cdef double dIntL = 0.0 * cdef double dtmp = 0.0 #<<<<<<<<<<<<<<* cdef double dbin, inv_dbin2 = 0.0 * cdef double tmp_count, tmp_data = 0.0 */ __pyx_v_dtmp = 0.0;
90: cdef double dbin, inv_dbin2 = 0.0
/* "histogram.pyx":90 * cdef double dIntL = 0.0 * cdef double dtmp = 0.0 * cdef double dbin, inv_dbin2 = 0.0 #<<<<<<<<<<<<<<* cdef double tmp_count, tmp_data = 0.0 * cdef double epsilon = 1e-10 */ __pyx_v_inv_dbin2 = 0.0;
91: cdef double tmp_count, tmp_data = 0.0
/* "histogram.pyx":91 * cdef double dtmp = 0.0 * cdef double dbin, inv_dbin2 = 0.0 * cdef double tmp_count, tmp_data = 0.0 #<<<<<<<<<<<<<<* cdef double epsilon = 1e-10 * */ __pyx_v_tmp_data = 0.0;
92: cdef double epsilon = 1e-10
/* "histogram.pyx":92 * cdef double dbin, inv_dbin2 = 0.0 * cdef double tmp_count, tmp_data = 0.0 * cdef double epsilon = 1e-10 #<<<<<<<<<<<<<<* * cdef long bin = 0 */ __pyx_v_epsilon = 1e-10;
93:
94: cdef long bin = 0
/* "histogram.pyx":94 * cdef double epsilon = 1e-10 * * cdef long bin = 0 #<<<<<<<<<<<<<<* cdef long i, idx, t, dest = 0 * if nthread is not None: */ __pyx_v_bin = 0;
95: cdef long i, idx, t, dest = 0
/* "histogram.pyx":95 * * cdef long bin = 0 * cdef long i, idx, t, dest = 0 #<<<<<<<<<<<<<<* if nthread is not None: * if isinstance(nthread, int) and (nthread > 0): */ __pyx_v_dest = 0;
96: if nthread is not None:
/* "histogram.pyx":96 * cdef long bin = 0 * cdef long i, idx, t, dest = 0 * if nthread is not None: #<<<<<<<<<<<<<<* if isinstance(nthread, int) and (nthread > 0): * omp_set_num_threads(<int > nthread) */ __pyx_t_4 = (__pyx_v_nthread != Py_None); if (__pyx_t_4) {
97: if isinstance(nthread, int) and (nthread > 0):
/* "histogram.pyx":97
* cdef long i, idx, t, dest = 0
* if nthread is not None:
* if isinstance(nthread, int) and (nthread > 0): # <<<<<<<<<<<<<<
* omp_set_num_threads(< int > nthread)
* #multi-threaded version of this algorithm fails on MacOSX
*/
__pyx_t_4 = PyInt_Check(__pyx_v_nthread);
if (__pyx_t_4) {
__pyx_t_1 = PyObject_RichCompare(__pyx_v_nthread, __pyx_int_0, Py_GT); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 97; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
__pyx_t_15 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_15 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 97; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
__pyx_t_16 = __pyx_t_15;
} else {
__pyx_t_16 = __pyx_t_4;
}
if (__pyx_t_16) {
98: omp_set_num_threads(< int > nthread)
/* "histogram.pyx":98
* if nthread is not None:
* if isinstance(nthread, int) and (nthread > 0):
* omp_set_num_threads(< int > nthread) # <<<<<<<<<<<<<<
* #multi-threaded version of this algorithm fails on MacOSX
* if sys.platform == "darwin":
*/
__pyx_t_17 = __Pyx_PyInt_AsInt(__pyx_v_nthread); if (unlikely((__pyx_t_17 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 98; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
omp_set_num_threads(((int)__pyx_t_17));
goto __pyx_L5;
}
__pyx_L5:;
goto __pyx_L4;
}
__pyx_L4:;
99: #multi-threaded version of this algorithm fails on MacOSX
100: if sys.platform == "darwin":
/* "histogram.pyx":100 * omp_set_num_threads(<int > nthread) * #multi-threaded version of this algorithm fails on MacOSX * if sys.platform == "darwin": #<<<<<<<<<<<<<<* omp_set_num_threads(<int > 1) * cdef double * bigCount =<double *> calloc(bins * omp_get_max_threads(), sizeof(double)) */ __pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s__sys); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_6 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s__platform); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_1 = PyObject_RichCompare(__pyx_t_6, ((PyObject *)__pyx_n_s__darwin), Py_EQ); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __pyx_t_16 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_16<0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_16) {
101: omp_set_num_threads(< int > 1)
/* "histogram.pyx":101
* #multi-threaded version of this algorithm fails on MacOSX
* if sys.platform == "darwin":
* omp_set_num_threads(< int > 1) # <<<<<<<<<<<<<<
* cdef double * bigCount = < double *> calloc(bins * omp_get_max_threads(), sizeof(double))
* cdef double * bigData = < double *> calloc(bins * omp_get_max_threads(), sizeof(double))
*/
omp_set_num_threads(((int)1));
goto __pyx_L6;
}
__pyx_L6:;
102: cdef double * bigCount = < double *> calloc(bins * omp_get_max_threads(), sizeof(double))
/* "histogram.pyx":102 * if sys.platform == "darwin": * omp_set_num_threads(<int > 1) * cdef double * bigCount =<double *> calloc(bins * omp_get_max_threads(), sizeof(double)) #<<<<<<<<<<<<<<* cdef double * bigData =<double *> calloc(bins * omp_get_max_threads(), sizeof(double)) * if pixelSize_in_Pos is None: */ __pyx_v_bigCount = ((double *)calloc((__pyx_v_bins * omp_get_max_threads()), (sizeof(double))));
103: cdef double * bigData = < double *> calloc(bins * omp_get_max_threads(), sizeof(double))
/* "histogram.pyx":103 * omp_set_num_threads(<int > 1) * cdef double * bigCount =<double *> calloc(bins * omp_get_max_threads(), sizeof(double)) * cdef double * bigData =<double *> calloc(bins * omp_get_max_threads(), sizeof(double)) #<<<<<<<<<<<<<<* if pixelSize_in_Pos is None: * dbin = 0.5 */ __pyx_v_bigData = ((double *)calloc((__pyx_v_bins * omp_get_max_threads()), (sizeof(double))));
104: if pixelSize_in_Pos is None:
/* "histogram.pyx":104 * cdef double * bigCount =<double *> calloc(bins * omp_get_max_threads(), sizeof(double)) * cdef double * bigData =<double *> calloc(bins * omp_get_max_threads(), sizeof(double)) * if pixelSize_in_Pos is None: #<<<<<<<<<<<<<<* dbin = 0.5 * inv_dbin2 = 4.0 */ __pyx_t_16 = (__pyx_v_pixelSize_in_Pos == Py_None); if (__pyx_t_16) {
105: dbin = 0.5
/* "histogram.pyx":105
* cdef double * bigData = < double *> calloc(bins * omp_get_max_threads(), sizeof(double))
* if pixelSize_in_Pos is None:
* dbin = 0.5 # <<<<<<<<<<<<<<
* inv_dbin2 = 4.0
* elif isinstance(pixelSize_in_Pos, (int, float)):
*/
__pyx_v_dbin = 0.5;
106: inv_dbin2 = 4.0
/* "histogram.pyx":106
* if pixelSize_in_Pos is None:
* dbin = 0.5
* inv_dbin2 = 4.0 # <<<<<<<<<<<<<<
* elif isinstance(pixelSize_in_Pos, (int, float)):
* dbin = 0.5 * (< double > pixelSize_in_Pos) * inv_bin_width
*/
__pyx_v_inv_dbin2 = 4.0;
goto __pyx_L7;
}
107: elif isinstance(pixelSize_in_Pos, (int, float)):
/* "histogram.pyx":107 * dbin = 0.5 * inv_dbin2 = 4.0 * elif isinstance(pixelSize_in_Pos, (int, float)): #<<<<<<<<<<<<<<* dbin = 0.5 * (<double > pixelSize_in_Pos) * inv_bin_width * if dbin > 0.0: */ __Pyx_INCREF(__pyx_v_pixelSize_in_Pos); __pyx_t_1 = __pyx_v_pixelSize_in_Pos; __pyx_t_16 = PyInt_Check(__pyx_t_1); if (!__pyx_t_16) { __pyx_t_4 = PyFloat_Check(__pyx_t_1); __pyx_t_15 = __pyx_t_4; } else { __pyx_t_15 = __pyx_t_16; } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_15) {
108: dbin = 0.5 * (< double > pixelSize_in_Pos) * inv_bin_width
/* "histogram.pyx":108
* inv_dbin2 = 4.0
* elif isinstance(pixelSize_in_Pos, (int, float)):
* dbin = 0.5 * (< double > pixelSize_in_Pos) * inv_bin_width # <<<<<<<<<<<<<<
* if dbin > 0.0:
* inv_dbin2 = 1 / dbin / dbin
*/
__pyx_t_14 = __pyx_PyFloat_AsDouble(__pyx_v_pixelSize_in_Pos); if (unlikely((__pyx_t_14 == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
__pyx_v_dbin = ((0.5 * ((double)__pyx_t_14)) * __pyx_v_inv_bin_width);
109: if dbin > 0.0:
/* "histogram.pyx":109
* elif isinstance(pixelSize_in_Pos, (int, float)):
* dbin = 0.5 * (< double > pixelSize_in_Pos) * inv_bin_width
* if dbin > 0.0: # <<<<<<<<<<<<<<
* inv_dbin2 = 1 / dbin / dbin
* else:
*/
__pyx_t_15 = (__pyx_v_dbin > 0.0);
if (__pyx_t_15) {
110: inv_dbin2 = 1 / dbin / dbin
/* "histogram.pyx":110
* dbin = 0.5 * (< double > pixelSize_in_Pos) * inv_bin_width
* if dbin > 0.0:
* inv_dbin2 = 1 / dbin / dbin # <<<<<<<<<<<<<<
* else:
* inv_dbin2 = 0.0
*/
__pyx_v_inv_dbin2 = ((1.0 / __pyx_v_dbin) / __pyx_v_dbin);
goto __pyx_L8;
}
/*else*/ {
111: else:
112: inv_dbin2 = 0.0
/* "histogram.pyx":112
* inv_dbin2 = 1 / dbin / dbin
* else:
* inv_dbin2 = 0.0 # <<<<<<<<<<<<<<
* elif isinstance(pixelSize_in_Pos, numpy.ndarray):
* pass #TODO
*/
__pyx_v_inv_dbin2 = 0.0;
}
__pyx_L8:;
goto __pyx_L7;
}
113: elif isinstance(pixelSize_in_Pos, numpy.ndarray):
/* "histogram.pyx":113 * else: * inv_dbin2 = 0.0 * elif isinstance(pixelSize_in_Pos, numpy.ndarray): #<<<<<<<<<<<<<<* pass #TODO * */ __pyx_t_15 = __Pyx_TypeCheck(__pyx_v_pixelSize_in_Pos, ((PyObject*)__pyx_ptype_5numpy_ndarray)); if (__pyx_t_15) { goto __pyx_L7; } __pyx_L7:;
114: pass #TODO
115:
116: if numpy.isnan(dbin) or numpy.isnan(inv_dbin2):
/* "histogram.pyx":116 * pass #TODO * * if numpy.isnan(dbin) or numpy.isnan(inv_dbin2): #<<<<<<<<<<<<<<* dbin = 0.0 * inv_dbin2 = 0.0 */ __pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s__numpy); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_6 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s__isnan); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_1 = PyFloat_FromDouble(__pyx_v_dbin); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_7 = PyTuple_New(1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); PyTuple_SET_ITEM(__pyx_t_7, 0, __pyx_t_1); __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_1 = PyObject_Call(__pyx_t_6, ((PyObject *)__pyx_t_7), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_7)); __pyx_t_7 = 0; __pyx_t_15 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_15<0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (!__pyx_t_15) { __pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s__numpy); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s__isnan); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_1 = PyFloat_FromDouble(__pyx_v_inv_dbin2); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); PyTuple_SET_ITEM(__pyx_t_6, 0, __pyx_t_1); __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_1 = PyObject_Call(__pyx_t_7, ((PyObject *)__pyx_t_6), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_6)); __pyx_t_6 = 0; __pyx_t_16 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_16<0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_4 = __pyx_t_16; } else { __pyx_t_4 = __pyx_t_15; } if (__pyx_t_4) {
117: dbin = 0.0
/* "histogram.pyx":117
*
* if numpy.isnan(dbin) or numpy.isnan(inv_dbin2):
* dbin = 0.0 # <<<<<<<<<<<<<<
* inv_dbin2 = 0.0
*
*/
__pyx_v_dbin = 0.0;
118: inv_dbin2 = 0.0
/* "histogram.pyx":118
* if numpy.isnan(dbin) or numpy.isnan(inv_dbin2):
* dbin = 0.0
* inv_dbin2 = 0.0 # <<<<<<<<<<<<<<
*
* with nogil:
*/
__pyx_v_inv_dbin2 = 0.0;
goto __pyx_L9;
}
__pyx_L9:;
119:
120: with nogil:
/* "histogram.pyx":120 * inv_dbin2 = 0.0 * * with nogil: #<<<<<<<<<<<<<<* for i in prange(size): * d = cdata[i] */ { #ifdef WITH_THREAD PyThreadState *_save; Py_UNBLOCK_THREADS #endif /*try:*/ { /* "histogram.pyx":120 * inv_dbin2 = 0.0 * * with nogil: #<<<<<<<<<<<<<<* for i in prange(size): * d = cdata[i] */ /*finally:*/ { #ifdef WITH_THREAD Py_BLOCK_THREADS #endif } }
121: for i in prange(size):
/* "histogram.pyx":121
*
* with nogil:
* for i in prange(size): # <<<<<<<<<<<<<<
* d = cdata[i]
* a = cpos[i]
*/
__pyx_t_5 = __pyx_v_size;
if (1 == 0) abort();
{
#if ((defined(__APPLE__) || defined(__OSX__)) && (defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95)))))
#undef likely
#undef unlikely
#define likely(x) (x)
#define unlikely(x) (x)
#endif
__pyx_t_19 = (__pyx_t_5 - 0) / 1;
if (__pyx_t_19 > 0)
{
#ifdef _OPENMP
#pragma omp parallel
#endif /* _OPENMP */
{
#ifdef _OPENMP
#pragma omp for lastprivate(__pyx_v_a) lastprivate(__pyx_v_dtmp) lastprivate(__pyx_v_ffbin) lastprivate(__pyx_v_fbin) lastprivate(__pyx_v_bin) lastprivate(__pyx_v_dIntR) lastprivate(__pyx_v_d) lastprivate(__pyx_v_dInt) firstprivate(__pyx_v_i) lastprivate(__pyx_v_i) lastprivate(__pyx_v_dest) lastprivate(__pyx_v_dIntL)
#endif /* _OPENMP */
for (__pyx_t_18 = 0; __pyx_t_18 < __pyx_t_19; __pyx_t_18++){
{
__pyx_v_i = 0 + 1 * __pyx_t_18;
/* Initialize private variables to invalid values */
__pyx_v_a = ((double)__PYX_NAN());
__pyx_v_dtmp = ((double)__PYX_NAN());
__pyx_v_ffbin = ((double)__PYX_NAN());
__pyx_v_fbin = ((double)__PYX_NAN());
__pyx_v_bin = ((long)0xbad0bad0);
__pyx_v_dIntR = ((double)__PYX_NAN());
__pyx_v_d = ((double)__PYX_NAN());
__pyx_v_dInt = ((double)__PYX_NAN());
__pyx_v_dest = ((long)0xbad0bad0);
__pyx_v_dIntL = ((double)__PYX_NAN());
122: d = cdata[i]
/* "histogram.pyx":122
* with nogil:
* for i in prange(size):
* d = cdata[i] # <<<<<<<<<<<<<<
* a = cpos[i]
* if (a < bin_edge_min) or (a > bin_edge_max):
*/
__pyx_t_20 = __pyx_v_i;
__pyx_v_d = (*((double *) ( /* dim=0 */ (__pyx_v_cdata.data + __pyx_t_20 * __pyx_v_cdata.strides[0]) )));
123: a = cpos[i]
/* "histogram.pyx":123
* for i in prange(size):
* d = cdata[i]
* a = cpos[i] # <<<<<<<<<<<<<<
* if (a < bin_edge_min) or (a > bin_edge_max):
* continue
*/
__pyx_t_21 = __pyx_v_i;
__pyx_v_a = (*((double *) ( /* dim=0 */ (__pyx_v_cpos.data + __pyx_t_21 * __pyx_v_cpos.strides[0]) )));
124: if (a < bin_edge_min) or (a > bin_edge_max):
/* "histogram.pyx":124
* d = cdata[i]
* a = cpos[i]
* if (a < bin_edge_min) or (a > bin_edge_max): # <<<<<<<<<<<<<<
* continue
* fbin = (a - bin_edge_min) * inv_bin_width
*/
__pyx_t_4 = (__pyx_v_a < __pyx_v_bin_edge_min);
if (!__pyx_t_4) {
__pyx_t_15 = (__pyx_v_a > __pyx_v_bin_edge_max);
__pyx_t_16 = __pyx_t_15;
} else {
__pyx_t_16 = __pyx_t_4;
}
if (__pyx_t_16) {
125: continue
/* "histogram.pyx":125
* a = cpos[i]
* if (a < bin_edge_min) or (a > bin_edge_max):
* continue # <<<<<<<<<<<<<<
* fbin = (a - bin_edge_min) * inv_bin_width
* ffbin = floor(fbin)
*/
goto __pyx_L13_continue;
goto __pyx_L17;
}
__pyx_L17:;
126: fbin = (a - bin_edge_min) * inv_bin_width
/* "histogram.pyx":126
* if (a < bin_edge_min) or (a > bin_edge_max):
* continue
* fbin = (a - bin_edge_min) * inv_bin_width # <<<<<<<<<<<<<<
* ffbin = floor(fbin)
* bin = < long > ffbin
*/
__pyx_v_fbin = ((__pyx_v_a - __pyx_v_bin_edge_min) * __pyx_v_inv_bin_width);
127: ffbin = floor(fbin)
/* "histogram.pyx":127
* continue
* fbin = (a - bin_edge_min) * inv_bin_width
* ffbin = floor(fbin) # <<<<<<<<<<<<<<
* bin = < long > ffbin
* dest = omp_get_thread_num() * bins + bin
*/
__pyx_v_ffbin = floor(__pyx_v_fbin);
128: bin = < long > ffbin
/* "histogram.pyx":128
* fbin = (a - bin_edge_min) * inv_bin_width
* ffbin = floor(fbin)
* bin = < long > ffbin # <<<<<<<<<<<<<<
* dest = omp_get_thread_num() * bins + bin
* dInt = 1.0
*/
__pyx_v_bin = ((long)__pyx_v_ffbin);
129: dest = omp_get_thread_num() * bins + bin
/* "histogram.pyx":129
* ffbin = floor(fbin)
* bin = < long > ffbin
* dest = omp_get_thread_num() * bins + bin # <<<<<<<<<<<<<<
* dInt = 1.0
* if bin > 0 :
*/
__pyx_v_dest = ((omp_get_thread_num() * __pyx_v_bins) + __pyx_v_bin);
130: dInt = 1.0
/* "histogram.pyx":130
* bin = < long > ffbin
* dest = omp_get_thread_num() * bins + bin
* dInt = 1.0 # <<<<<<<<<<<<<<
* if bin > 0 :
* dtmp = ffbin - (fbin - dbin)
*/
__pyx_v_dInt = 1.0;
131: if bin > 0 :
/* "histogram.pyx":131
* dest = omp_get_thread_num() * bins + bin
* dInt = 1.0
* if bin > 0 : # <<<<<<<<<<<<<<
* dtmp = ffbin - (fbin - dbin)
* if dtmp > 0:
*/
__pyx_t_16 = (__pyx_v_bin > 0);
if (__pyx_t_16) {
132: dtmp = ffbin - (fbin - dbin)
/* "histogram.pyx":132
* dInt = 1.0
* if bin > 0 :
* dtmp = ffbin - (fbin - dbin) # <<<<<<<<<<<<<<
* if dtmp > 0:
* dIntL = 0.5 * dtmp * dtmp * inv_dbin2
*/
__pyx_v_dtmp = (__pyx_v_ffbin - (__pyx_v_fbin - __pyx_v_dbin));
133: if dtmp > 0:
/* "histogram.pyx":133
* if bin > 0 :
* dtmp = ffbin - (fbin - dbin)
* if dtmp > 0: # <<<<<<<<<<<<<<
* dIntL = 0.5 * dtmp * dtmp * inv_dbin2
* dInt = dInt - dIntL
*/
__pyx_t_16 = (__pyx_v_dtmp > 0.0);
if (__pyx_t_16) {
134: dIntL = 0.5 * dtmp * dtmp * inv_dbin2
/* "histogram.pyx":134
* dtmp = ffbin - (fbin - dbin)
* if dtmp > 0:
* dIntL = 0.5 * dtmp * dtmp * inv_dbin2 # <<<<<<<<<<<<<<
* dInt = dInt - dIntL
* bigCount[dest - 1] += dIntL
*/
__pyx_v_dIntL = (((0.5 * __pyx_v_dtmp) * __pyx_v_dtmp) * __pyx_v_inv_dbin2);
135: dInt = dInt - dIntL
/* "histogram.pyx":135
* if dtmp > 0:
* dIntL = 0.5 * dtmp * dtmp * inv_dbin2
* dInt = dInt - dIntL # <<<<<<<<<<<<<<
* bigCount[dest - 1] += dIntL
* bigData[dest - 1] += d * dIntL
*/
__pyx_v_dInt = (__pyx_v_dInt - __pyx_v_dIntL);
136: bigCount[dest - 1] += dIntL
/* "histogram.pyx":136
* dIntL = 0.5 * dtmp * dtmp * inv_dbin2
* dInt = dInt - dIntL
* bigCount[dest - 1] += dIntL # <<<<<<<<<<<<<<
* bigData[dest - 1] += d * dIntL
*
*/
__pyx_t_22 = (__pyx_v_dest - 1);
(__pyx_v_bigCount[__pyx_t_22]) = ((__pyx_v_bigCount[__pyx_t_22]) + __pyx_v_dIntL);
137: bigData[dest - 1] += d * dIntL
/* "histogram.pyx":137
* dInt = dInt - dIntL
* bigCount[dest - 1] += dIntL
* bigData[dest - 1] += d * dIntL # <<<<<<<<<<<<<<
*
* if bin < bins - 1 :
*/
__pyx_t_22 = (__pyx_v_dest - 1);
(__pyx_v_bigData[__pyx_t_22]) = ((__pyx_v_bigData[__pyx_t_22]) + (__pyx_v_d * __pyx_v_dIntL));
goto __pyx_L19;
}
__pyx_L19:;
goto __pyx_L18;
}
__pyx_L18:;
138:
139: if bin < bins - 1 :
/* "histogram.pyx":139
* bigData[dest - 1] += d * dIntL
*
* if bin < bins - 1 : # <<<<<<<<<<<<<<
* dtmp = fbin + dbin - ffbin - 1
* if dtmp > 0 :
*/
__pyx_t_16 = (__pyx_v_bin < (__pyx_v_bins - 1));
if (__pyx_t_16) {
140: dtmp = fbin + dbin - ffbin - 1
/* "histogram.pyx":140
*
* if bin < bins - 1 :
* dtmp = fbin + dbin - ffbin - 1 # <<<<<<<<<<<<<<
* if dtmp > 0 :
* dIntR = 0.5 * dtmp * dtmp * inv_dbin2
*/
__pyx_v_dtmp = (((__pyx_v_fbin + __pyx_v_dbin) - __pyx_v_ffbin) - 1.0);
141: if dtmp > 0 :
/* "histogram.pyx":141
* if bin < bins - 1 :
* dtmp = fbin + dbin - ffbin - 1
* if dtmp > 0 : # <<<<<<<<<<<<<<
* dIntR = 0.5 * dtmp * dtmp * inv_dbin2
* dInt = dInt - dIntR
*/
__pyx_t_16 = (__pyx_v_dtmp > 0.0);
if (__pyx_t_16) {
142: dIntR = 0.5 * dtmp * dtmp * inv_dbin2
/* "histogram.pyx":142
* dtmp = fbin + dbin - ffbin - 1
* if dtmp > 0 :
* dIntR = 0.5 * dtmp * dtmp * inv_dbin2 # <<<<<<<<<<<<<<
* dInt = dInt - dIntR
* bigCount[dest + 1] += dIntR
*/
__pyx_v_dIntR = (((0.5 * __pyx_v_dtmp) * __pyx_v_dtmp) * __pyx_v_inv_dbin2);
143: dInt = dInt - dIntR
/* "histogram.pyx":143
* if dtmp > 0 :
* dIntR = 0.5 * dtmp * dtmp * inv_dbin2
* dInt = dInt - dIntR # <<<<<<<<<<<<<<
* bigCount[dest + 1] += dIntR
* bigData[dest + 1] += d * dIntR
*/
__pyx_v_dInt = (__pyx_v_dInt - __pyx_v_dIntR);
144: bigCount[dest + 1] += dIntR
/* "histogram.pyx":144
* dIntR = 0.5 * dtmp * dtmp * inv_dbin2
* dInt = dInt - dIntR
* bigCount[dest + 1] += dIntR # <<<<<<<<<<<<<<
* bigData[dest + 1] += d * dIntR
* bigCount[dest] += dInt
*/
__pyx_t_22 = (__pyx_v_dest + 1);
(__pyx_v_bigCount[__pyx_t_22]) = ((__pyx_v_bigCount[__pyx_t_22]) + __pyx_v_dIntR);
145: bigData[dest + 1] += d * dIntR
/* "histogram.pyx":145
* dInt = dInt - dIntR
* bigCount[dest + 1] += dIntR
* bigData[dest + 1] += d * dIntR # <<<<<<<<<<<<<<
* bigCount[dest] += dInt
* bigData[dest] += d * dInt
*/
__pyx_t_22 = (__pyx_v_dest + 1);
(__pyx_v_bigData[__pyx_t_22]) = ((__pyx_v_bigData[__pyx_t_22]) + (__pyx_v_d * __pyx_v_dIntR));
goto __pyx_L21;
}
__pyx_L21:;
goto __pyx_L20;
}
__pyx_L20:;
146: bigCount[dest] += dInt
/* "histogram.pyx":146
* bigCount[dest + 1] += dIntR
* bigData[dest + 1] += d * dIntR
* bigCount[dest] += dInt # <<<<<<<<<<<<<<
* bigData[dest] += d * dInt
*
*/
__pyx_t_22 = __pyx_v_dest;
(__pyx_v_bigCount[__pyx_t_22]) = ((__pyx_v_bigCount[__pyx_t_22]) + __pyx_v_dInt);
147: bigData[dest] += d * dInt
/* "histogram.pyx":147
* bigData[dest + 1] += d * dIntR
* bigCount[dest] += dInt
* bigData[dest] += d * dInt # <<<<<<<<<<<<<<
*
* for idx in prange(bins):
*/
__pyx_t_22 = __pyx_v_dest;
(__pyx_v_bigData[__pyx_t_22]) = ((__pyx_v_bigData[__pyx_t_22]) + (__pyx_v_d * __pyx_v_dInt));
goto __pyx_L23;
__pyx_L13_continue:;
goto __pyx_L23;
__pyx_L23:;
}
}
}
}
}
#if ((defined(__APPLE__) || defined(__OSX__)) && (defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95)))))
#undef likely
#undef unlikely
#define likely(x) __builtin_expect(!!(x), 1)
#define unlikely(x) __builtin_expect(!!(x), 0)
#endif
148:
149: for idx in prange(bins):
/* "histogram.pyx":149
* bigData[dest] += d * dInt
*
* for idx in prange(bins): # <<<<<<<<<<<<<<
* outPos[idx] = bin_edge_min + (0.5 +< double > idx) * bin_width
* tmp_count = 0.0
*/
__pyx_t_19 = __pyx_v_bins;
if (1 == 0) abort();
{
#if ((defined(__APPLE__) || defined(__OSX__)) && (defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95)))))
#undef likely
#undef unlikely
#define likely(x) (x)
#define unlikely(x) (x)
#endif
__pyx_t_5 = (__pyx_t_19 - 0) / 1;
if (__pyx_t_5 > 0)
{
#ifdef _OPENMP
#pragma omp parallel
#endif /* _OPENMP */
{
#ifdef _OPENMP
#pragma omp for reduction(+:__pyx_v_tmp_count) reduction(+:__pyx_v_tmp_data) firstprivate(__pyx_v_idx) lastprivate(__pyx_v_idx) lastprivate(__pyx_v_t) lastprivate(__pyx_v_dest)
#endif /* _OPENMP */
for (__pyx_t_18 = 0; __pyx_t_18 < __pyx_t_5; __pyx_t_18++){
{
__pyx_v_idx = 0 + 1 * __pyx_t_18;
/* Initialize private variables to invalid values */
__pyx_v_t = ((long)0xbad0bad0);
__pyx_v_dest = ((long)0xbad0bad0);
150: outPos[idx] = bin_edge_min + (0.5 +< double > idx) * bin_width
/* "histogram.pyx":150
*
* for idx in prange(bins):
* outPos[idx] = bin_edge_min + (0.5 +< double > idx) * bin_width # <<<<<<<<<<<<<<
* tmp_count = 0.0
* tmp_data = 0.0
*/
__pyx_t_22 = __pyx_v_idx;
*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outPos.rcbuffer->pybuffer.buf, __pyx_t_22, __pyx_pybuffernd_outPos.diminfo[0].strides) = (__pyx_v_bin_edge_min + ((0.5 + ((double)__pyx_v_idx)) * __pyx_v_bin_width));
151: tmp_count = 0.0
/* "histogram.pyx":151
* for idx in prange(bins):
* outPos[idx] = bin_edge_min + (0.5 +< double > idx) * bin_width
* tmp_count = 0.0 # <<<<<<<<<<<<<<
* tmp_data = 0.0
* for t in range(omp_get_max_threads()):
*/
__pyx_v_tmp_count = 0.0;
152: tmp_data = 0.0
/* "histogram.pyx":152
* outPos[idx] = bin_edge_min + (0.5 +< double > idx) * bin_width
* tmp_count = 0.0
* tmp_data = 0.0 # <<<<<<<<<<<<<<
* for t in range(omp_get_max_threads()):
* dest = t * bins + idx
*/
__pyx_v_tmp_data = 0.0;
153: for t in range(omp_get_max_threads()):
/* "histogram.pyx":153
* tmp_count = 0.0
* tmp_data = 0.0
* for t in range(omp_get_max_threads()): # <<<<<<<<<<<<<<
* dest = t * bins + idx
* tmp_count += bigCount[dest]
*/
__pyx_t_17 = omp_get_max_threads();
for (__pyx_t_23 = 0; __pyx_t_23 < __pyx_t_17; __pyx_t_23+=1) {
__pyx_v_t = __pyx_t_23;
154: dest = t * bins + idx
/* "histogram.pyx":154
* tmp_data = 0.0
* for t in range(omp_get_max_threads()):
* dest = t * bins + idx # <<<<<<<<<<<<<<
* tmp_count += bigCount[dest]
* tmp_data += bigData[dest]
*/
__pyx_v_dest = ((__pyx_v_t * __pyx_v_bins) + __pyx_v_idx);
155: tmp_count += bigCount[dest]
/* "histogram.pyx":155
* for t in range(omp_get_max_threads()):
* dest = t * bins + idx
* tmp_count += bigCount[dest] # <<<<<<<<<<<<<<
* tmp_data += bigData[dest]
* outCount[idx] += tmp_count
*/
__pyx_v_tmp_count = (__pyx_v_tmp_count + (__pyx_v_bigCount[__pyx_v_dest]));
156: tmp_data += bigData[dest]
/* "histogram.pyx":156
* dest = t * bins + idx
* tmp_count += bigCount[dest]
* tmp_data += bigData[dest] # <<<<<<<<<<<<<<
* outCount[idx] += tmp_count
* outData[idx] += tmp_data
*/
__pyx_v_tmp_data = (__pyx_v_tmp_data + (__pyx_v_bigData[__pyx_v_dest]));
}
157: outCount[idx] += tmp_count
/* "histogram.pyx":157
* tmp_count += bigCount[dest]
* tmp_data += bigData[dest]
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__pyx_t_23 = __pyx_v_idx;
*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_23, __pyx_pybuffernd_outCount.diminfo[0].strides) += __pyx_v_tmp_count;
158: outData[idx] += tmp_data
/* "histogram.pyx":158
* tmp_data += bigData[dest]
* outCount[idx] += tmp_count
* outData[idx] += tmp_data # <<<<<<<<<<<<<<
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__pyx_t_24 = __pyx_v_idx;
*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_24, __pyx_pybuffernd_outData.diminfo[0].strides) += __pyx_v_tmp_data;
159: if outCount[idx] > epsilon:
/* "histogram.pyx":159
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* outData[idx] += tmp_data
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__pyx_t_25 = __pyx_v_idx;
__pyx_t_16 = ((*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_25, __pyx_pybuffernd_outCount.diminfo[0].strides)) > __pyx_v_epsilon);
if (__pyx_t_16) {
160: outMerge[idx] += tmp_data / tmp_count
/* "histogram.pyx":160
* outData[idx] += tmp_data
* if outCount[idx] > epsilon:
* outMerge[idx] += tmp_data / tmp_count # <<<<<<<<<<<<<<
* else:
* outMerge[idx] += dummy
*/
__pyx_t_26 = __pyx_v_idx;
*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outMerge.rcbuffer->pybuffer.buf, __pyx_t_26, __pyx_pybuffernd_outMerge.diminfo[0].strides) += (__pyx_v_tmp_data / __pyx_v_tmp_count);
goto __pyx_L30;
}
/*else*/ {
161: else:
162: outMerge[idx] += dummy
/* "histogram.pyx":162
* outMerge[idx] += tmp_data / tmp_count
* else:
* outMerge[idx] += dummy # <<<<<<<<<<<<<<
*
* free(bigCount)
*/
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*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outMerge.rcbuffer->pybuffer.buf, __pyx_t_27, __pyx_pybuffernd_outMerge.diminfo[0].strides) += __pyx_v_dummy;
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__pyx_L30:;
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}
#if ((defined(__APPLE__) || defined(__OSX__)) && (defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95)))))
#undef likely
#undef unlikely
#define likely(x) __builtin_expect(!!(x), 1)
#define unlikely(x) __builtin_expect(!!(x), 0)
#endif
}
163:
164: free(bigCount)
/* "histogram.pyx":164 * outMerge[idx] += dummy * * free(bigCount) #<<<<<<<<<<<<<<* free(bigData) * return outPos, outMerge, outData, outCount */ free(__pyx_v_bigCount);
165: free(bigData)
/* "histogram.pyx":165 * * free(bigCount) * free(bigData) #<<<<<<<<<<<<<<* return outPos, outMerge, outData, outCount * */ free(__pyx_v_bigData);
166: return outPos, outMerge, outData, outCount
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167:
168:
169: @cython.cdivision(True)
170: @cython.boundscheck(False)
171: @cython.wraparound(False)
172: def histogram2d(numpy.ndarray pos0 not None,
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179: """
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189:
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211: cdef numpy.ndarray[numpy.float64_t, ndim = 2] outMerge = numpy.zeros((bin0, bin1), dtype="float64")
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212: cdef numpy.ndarray[numpy.float64_t, ndim = 1] edges0, edges1
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214: cdef double max0 = pos0.max() * EPS32
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215: cdef double min1 = pos1.min()
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217: cdef double idp0 = (< double > bin0) / (max0 - min0)
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218: cdef double idp1 = (< double > bin1) / (max1 - min1)
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219: cdef double dbin0 = 0.5, dbin1 = 0.5
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220: cdef double fbin0, fbin1, p0, p1, d, rest, delta0l, delta0r, delta1l, delta1r, aera
221: cdef double epsilon = 1e-10
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222:
223: edges0 = numpy.linspace(min0+(0.5/idp0),max0-(0.5/idp0),bin0)
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224: edges1 = numpy.linspace(min1+(0.5/idp1),max1-(0.5/idp1),bin1)
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225: if nthread is not None:
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226: if isinstance(nthread, int) and (nthread > 0):
/* "histogram.pyx":226
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227: omp_set_num_threads(< int > nthread)
/* "histogram.pyx":227
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omp_set_num_threads(((int)__pyx_t_12));
goto __pyx_L18;
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__pyx_L18:;
goto __pyx_L17;
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__pyx_L17:;
228: with nogil:
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229: for i in range(size):
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230: p0 = cpos0[i]
/* "histogram.pyx":230
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* d = data[i]
*/
__pyx_t_24 = __pyx_v_i;
__pyx_v_p0 = (*((double *) ( /* dim=0 */ (__pyx_v_cpos0.data + __pyx_t_24 * __pyx_v_cpos0.strides[0]) )));
231: p1 = cpos1[i]
/* "histogram.pyx":231
* for i in range(size):
* p0 = cpos0[i]
* p1 = cpos1[i] # <<<<<<<<<<<<<<
* d = data[i]
* fbin0 = (p0 - min0) * idp0
*/
__pyx_t_25 = __pyx_v_i;
__pyx_v_p1 = (*((double *) ( /* dim=0 */ (__pyx_v_cpos1.data + __pyx_t_25 * __pyx_v_cpos1.strides[0]) )));
232: d = data[i]
/* "histogram.pyx":232
* p0 = cpos0[i]
* p1 = cpos1[i]
* d = data[i] # <<<<<<<<<<<<<<
* fbin0 = (p0 - min0) * idp0
* fbin1 = (p1 - min1) * idp1
*/
__pyx_t_26 = __pyx_v_i;
__pyx_v_d = (*((double *) ( /* dim=0 */ (__pyx_v_data.data + __pyx_t_26 * __pyx_v_data.strides[0]) )));
233: fbin0 = (p0 - min0) * idp0
/* "histogram.pyx":233
* p1 = cpos1[i]
* d = data[i]
* fbin0 = (p0 - min0) * idp0 # <<<<<<<<<<<<<<
* fbin1 = (p1 - min1) * idp1
* b0 = < long > floor(fbin0)
*/
__pyx_v_fbin0 = ((__pyx_v_p0 - __pyx_v_min0) * __pyx_v_idp0);
234: fbin1 = (p1 - min1) * idp1
/* "histogram.pyx":234
* d = data[i]
* fbin0 = (p0 - min0) * idp0
* fbin1 = (p1 - min1) * idp1 # <<<<<<<<<<<<<<
* b0 = < long > floor(fbin0)
* b1 = < long > floor(fbin1)
*/
__pyx_v_fbin1 = ((__pyx_v_p1 - __pyx_v_min1) * __pyx_v_idp1);
235: b0 = < long > floor(fbin0)
/* "histogram.pyx":235
* fbin0 = (p0 - min0) * idp0
* fbin1 = (p1 - min1) * idp1
* b0 = < long > floor(fbin0) # <<<<<<<<<<<<<<
* b1 = < long > floor(fbin1)
* if b0 == bin0:
*/
__pyx_v_b0 = ((long)floor(__pyx_v_fbin0));
236: b1 = < long > floor(fbin1)
/* "histogram.pyx":236
* fbin1 = (p1 - min1) * idp1
* b0 = < long > floor(fbin0)
* b1 = < long > floor(fbin1) # <<<<<<<<<<<<<<
* if b0 == bin0:
* b0 = bin0 - 1
*/
__pyx_v_b1 = ((long)floor(__pyx_v_fbin1));
237: if b0 == bin0:
/* "histogram.pyx":237
* b0 = < long > floor(fbin0)
* b1 = < long > floor(fbin1)
* if b0 == bin0: # <<<<<<<<<<<<<<
* b0 = bin0 - 1
* fbin0 = (< double > bin0) - 0.5
*/
__pyx_t_23 = (__pyx_v_b0 == __pyx_v_bin0);
if (__pyx_t_23) {
238: b0 = bin0 - 1
/* "histogram.pyx":238
* b1 = < long > floor(fbin1)
* if b0 == bin0:
* b0 = bin0 - 1 # <<<<<<<<<<<<<<
* fbin0 = (< double > bin0) - 0.5
* elif b0 == 0:
*/
__pyx_v_b0 = (__pyx_v_bin0 - 1);
239: fbin0 = (< double > bin0) - 0.5
/* "histogram.pyx":239
* if b0 == bin0:
* b0 = bin0 - 1
* fbin0 = (< double > bin0) - 0.5 # <<<<<<<<<<<<<<
* elif b0 == 0:
* fbin0 = 0.5
*/
__pyx_v_fbin0 = (((double)__pyx_v_bin0) - 0.5);
goto __pyx_L24;
}
240: elif b0 == 0:
/* "histogram.pyx":240
* b0 = bin0 - 1
* fbin0 = (< double > bin0) - 0.5
* elif b0 == 0: # <<<<<<<<<<<<<<
* fbin0 = 0.5
* if b1 == bin1:
*/
__pyx_t_23 = (__pyx_v_b0 == 0);
if (__pyx_t_23) {
241: fbin0 = 0.5
/* "histogram.pyx":241
* fbin0 = (< double > bin0) - 0.5
* elif b0 == 0:
* fbin0 = 0.5 # <<<<<<<<<<<<<<
* if b1 == bin1:
* b1 = bin1 - 1
*/
__pyx_v_fbin0 = 0.5;
goto __pyx_L24;
}
__pyx_L24:;
242: if b1 == bin1:
/* "histogram.pyx":242
* elif b0 == 0:
* fbin0 = 0.5
* if b1 == bin1: # <<<<<<<<<<<<<<
* b1 = bin1 - 1
* fbin1 = (< double > bin1) - 0.5
*/
__pyx_t_23 = (__pyx_v_b1 == __pyx_v_bin1);
if (__pyx_t_23) {
243: b1 = bin1 - 1
/* "histogram.pyx":243
* fbin0 = 0.5
* if b1 == bin1:
* b1 = bin1 - 1 # <<<<<<<<<<<<<<
* fbin1 = (< double > bin1) - 0.5
* elif b1 == 0:
*/
__pyx_v_b1 = (__pyx_v_bin1 - 1);
244: fbin1 = (< double > bin1) - 0.5
/* "histogram.pyx":244
* if b1 == bin1:
* b1 = bin1 - 1
* fbin1 = (< double > bin1) - 0.5 # <<<<<<<<<<<<<<
* elif b1 == 0:
* fbin1 = 0.5
*/
__pyx_v_fbin1 = (((double)__pyx_v_bin1) - 0.5);
goto __pyx_L25;
}
245: elif b1 == 0:
/* "histogram.pyx":245
* b1 = bin1 - 1
* fbin1 = (< double > bin1) - 0.5
* elif b1 == 0: # <<<<<<<<<<<<<<
* fbin1 = 0.5
*
*/
__pyx_t_23 = (__pyx_v_b1 == 0);
if (__pyx_t_23) {
246: fbin1 = 0.5
/* "histogram.pyx":246
* fbin1 = (< double > bin1) - 0.5
* elif b1 == 0:
* fbin1 = 0.5 # <<<<<<<<<<<<<<
*
* delta0l = fbin0 -< double > b0 - dbin0
*/
__pyx_v_fbin1 = 0.5;
goto __pyx_L25;
}
__pyx_L25:;
247:
248: delta0l = fbin0 -< double > b0 - dbin0
/* "histogram.pyx":248
* fbin1 = 0.5
*
* delta0l = fbin0 -< double > b0 - dbin0 # <<<<<<<<<<<<<<
* delta0r = fbin0 -< double > b0 - 1 + dbin0
* delta1l = fbin1 -< double > b1 - dbin1
*/
__pyx_v_delta0l = ((__pyx_v_fbin0 - ((double)__pyx_v_b0)) - __pyx_v_dbin0);
249: delta0r = fbin0 -< double > b0 - 1 + dbin0
/* "histogram.pyx":249
*
* delta0l = fbin0 -< double > b0 - dbin0
* delta0r = fbin0 -< double > b0 - 1 + dbin0 # <<<<<<<<<<<<<<
* delta1l = fbin1 -< double > b1 - dbin1
* delta1r = fbin1 -< double > b1 - 1 + dbin1
*/
__pyx_v_delta0r = (((__pyx_v_fbin0 - ((double)__pyx_v_b0)) - 1.0) + __pyx_v_dbin0);
250: delta1l = fbin1 -< double > b1 - dbin1
/* "histogram.pyx":250
* delta0l = fbin0 -< double > b0 - dbin0
* delta0r = fbin0 -< double > b0 - 1 + dbin0
* delta1l = fbin1 -< double > b1 - dbin1 # <<<<<<<<<<<<<<
* delta1r = fbin1 -< double > b1 - 1 + dbin1
* rest = 1.0
*/
__pyx_v_delta1l = ((__pyx_v_fbin1 - ((double)__pyx_v_b1)) - __pyx_v_dbin1);
251: delta1r = fbin1 -< double > b1 - 1 + dbin1
/* "histogram.pyx":251
* delta0r = fbin0 -< double > b0 - 1 + dbin0
* delta1l = fbin1 -< double > b1 - dbin1
* delta1r = fbin1 -< double > b1 - 1 + dbin1 # <<<<<<<<<<<<<<
* rest = 1.0
* if csplit == 1:
*/
__pyx_v_delta1r = (((__pyx_v_fbin1 - ((double)__pyx_v_b1)) - 1.0) + __pyx_v_dbin1);
252: rest = 1.0
/* "histogram.pyx":252
* delta1l = fbin1 -< double > b1 - dbin1
* delta1r = fbin1 -< double > b1 - 1 + dbin1
* rest = 1.0 # <<<<<<<<<<<<<<
* if csplit == 1:
* if delta0l < 0 and b0 > 0:
*/
__pyx_v_rest = 1.0;
253: if csplit == 1:
/* "histogram.pyx":253
* delta1r = fbin1 -< double > b1 - 1 + dbin1
* rest = 1.0
* if csplit == 1: # <<<<<<<<<<<<<<
* if delta0l < 0 and b0 > 0:
* if delta1l < 0 and b1 > 0:
*/
__pyx_t_23 = (__pyx_v_csplit == 1);
if (__pyx_t_23) {
254: if delta0l < 0 and b0 > 0:
/* "histogram.pyx":254
* rest = 1.0
* if csplit == 1:
* if delta0l < 0 and b0 > 0: # <<<<<<<<<<<<<<
* if delta1l < 0 and b1 > 0:
* area = delta0l * delta1l
*/
__pyx_t_23 = (__pyx_v_delta0l < 0.0);
if (__pyx_t_23) {
__pyx_t_4 = (__pyx_v_b0 > 0);
__pyx_t_22 = __pyx_t_4;
} else {
__pyx_t_22 = __pyx_t_23;
}
if (__pyx_t_22) {
255: if delta1l < 0 and b1 > 0:
/* "histogram.pyx":255
* if csplit == 1:
* if delta0l < 0 and b0 > 0:
* if delta1l < 0 and b1 > 0: # <<<<<<<<<<<<<<
* area = delta0l * delta1l
* rest -= area
*/
__pyx_t_22 = (__pyx_v_delta1l < 0.0);
if (__pyx_t_22) {
__pyx_t_23 = (__pyx_v_b1 > 0);
__pyx_t_4 = __pyx_t_23;
} else {
__pyx_t_4 = __pyx_t_22;
}
if (__pyx_t_4) {
256: area = delta0l * delta1l
/* "histogram.pyx":256
* if delta0l < 0 and b0 > 0:
* if delta1l < 0 and b1 > 0:
* area = delta0l * delta1l # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 - 1, b1 - 1] += area
*/
__pyx_v_area = (__pyx_v_delta0l * __pyx_v_delta1l);
257: rest -= area
/* "histogram.pyx":257
* if delta1l < 0 and b1 > 0:
* area = delta0l * delta1l
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 - 1, b1 - 1] += area
* outData[b0 - 1, b1 - 1] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
258: outCount[b0 - 1, b1 - 1] += area
/* "histogram.pyx":258
* area = delta0l * delta1l
* rest -= area
* outCount[b0 - 1, b1 - 1] += area # <<<<<<<<<<<<<<
* outData[b0 - 1, b1 - 1] += area * d
*
*/
__pyx_t_27 = (__pyx_v_b0 - 1);
__pyx_t_28 = (__pyx_v_b1 - 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_27, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_28, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
259: outData[b0 - 1, b1 - 1] += area * d
/* "histogram.pyx":259
* rest -= area
* outCount[b0 - 1, b1 - 1] += area
* outData[b0 - 1, b1 - 1] += area * d # <<<<<<<<<<<<<<
*
* area = (-delta0l) * (1 + delta1l)
*/
__pyx_t_29 = (__pyx_v_b0 - 1);
__pyx_t_30 = (__pyx_v_b1 - 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_29, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_30, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
260:
261: area = (-delta0l) * (1 + delta1l)
/* "histogram.pyx":261
* outData[b0 - 1, b1 - 1] += area * d
*
* area = (-delta0l) * (1 + delta1l) # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 - 1, b1 ] += area
*/
__pyx_v_area = ((-__pyx_v_delta0l) * (1.0 + __pyx_v_delta1l));
262: rest -= area
/* "histogram.pyx":262
*
* area = (-delta0l) * (1 + delta1l)
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 - 1, b1 ] += area
* outData[b0 - 1, b1 ] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
263: outCount[b0 - 1, b1 ] += area
/* "histogram.pyx":263
* area = (-delta0l) * (1 + delta1l)
* rest -= area
* outCount[b0 - 1, b1 ] += area # <<<<<<<<<<<<<<
* outData[b0 - 1, b1 ] += area * d
*
*/
__pyx_t_31 = (__pyx_v_b0 - 1);
__pyx_t_32 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_31, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_32, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
264: outData[b0 - 1, b1 ] += area * d
/* "histogram.pyx":264
* rest -= area
* outCount[b0 - 1, b1 ] += area
* outData[b0 - 1, b1 ] += area * d # <<<<<<<<<<<<<<
*
* area = (1 + delta0l) * (-delta1l)
*/
__pyx_t_33 = (__pyx_v_b0 - 1);
__pyx_t_34 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_33, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_34, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
265:
266: area = (1 + delta0l) * (-delta1l)
/* "histogram.pyx":266
* outData[b0 - 1, b1 ] += area * d
*
* area = (1 + delta0l) * (-delta1l) # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 , b1 - 1 ] += area
*/
__pyx_v_area = ((1.0 + __pyx_v_delta0l) * (-__pyx_v_delta1l));
267: rest -= area
/* "histogram.pyx":267
*
* area = (1 + delta0l) * (-delta1l)
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 , b1 - 1 ] += area
* outData[b0 , b1 - 1 ] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
268: outCount[b0 , b1 - 1 ] += area
/* "histogram.pyx":268
* area = (1 + delta0l) * (-delta1l)
* rest -= area
* outCount[b0 , b1 - 1 ] += area # <<<<<<<<<<<<<<
* outData[b0 , b1 - 1 ] += area * d
*
*/
__pyx_t_35 = __pyx_v_b0;
__pyx_t_36 = (__pyx_v_b1 - 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_35, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_36, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
269: outData[b0 , b1 - 1 ] += area * d
/* "histogram.pyx":269
* rest -= area
* outCount[b0 , b1 - 1 ] += area
* outData[b0 , b1 - 1 ] += area * d # <<<<<<<<<<<<<<
*
* elif delta1r > 0 and b1 < bin1 - 1:
*/
__pyx_t_37 = __pyx_v_b0;
__pyx_t_38 = (__pyx_v_b1 - 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_37, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_38, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
goto __pyx_L28;
}
270:
271: elif delta1r > 0 and b1 < bin1 - 1:
/* "histogram.pyx":271
* outData[b0 , b1 - 1 ] += area * d
*
* elif delta1r > 0 and b1 < bin1 - 1: # <<<<<<<<<<<<<<
* area = -delta0l * delta1r
* rest -= area
*/
__pyx_t_4 = (__pyx_v_delta1r > 0.0);
if (__pyx_t_4) {
__pyx_t_22 = (__pyx_v_b1 < (__pyx_v_bin1 - 1));
__pyx_t_23 = __pyx_t_22;
} else {
__pyx_t_23 = __pyx_t_4;
}
if (__pyx_t_23) {
272: area = -delta0l * delta1r
/* "histogram.pyx":272
*
* elif delta1r > 0 and b1 < bin1 - 1:
* area = -delta0l * delta1r # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 - 1, b1 + 1] += area
*/
__pyx_v_area = ((-__pyx_v_delta0l) * __pyx_v_delta1r);
273: rest -= area
/* "histogram.pyx":273
* elif delta1r > 0 and b1 < bin1 - 1:
* area = -delta0l * delta1r
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 - 1, b1 + 1] += area
* outData[b0 - 1, b1 + 1] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
274: outCount[b0 - 1, b1 + 1] += area
/* "histogram.pyx":274
* area = -delta0l * delta1r
* rest -= area
* outCount[b0 - 1, b1 + 1] += area # <<<<<<<<<<<<<<
* outData[b0 - 1, b1 + 1] += area * d
*
*/
__pyx_t_39 = (__pyx_v_b0 - 1);
__pyx_t_40 = (__pyx_v_b1 + 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_39, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_40, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
275: outData[b0 - 1, b1 + 1] += area * d
/* "histogram.pyx":275
* rest -= area
* outCount[b0 - 1, b1 + 1] += area
* outData[b0 - 1, b1 + 1] += area * d # <<<<<<<<<<<<<<
*
* area = (-delta0l) * (1 - delta1r)
*/
__pyx_t_41 = (__pyx_v_b0 - 1);
__pyx_t_42 = (__pyx_v_b1 + 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_41, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_42, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
276:
277: area = (-delta0l) * (1 - delta1r)
/* "histogram.pyx":277
* outData[b0 - 1, b1 + 1] += area * d
*
* area = (-delta0l) * (1 - delta1r) # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 - 1, b1 ] += area
*/
__pyx_v_area = ((-__pyx_v_delta0l) * (1.0 - __pyx_v_delta1r));
278: rest -= area
/* "histogram.pyx":278
*
* area = (-delta0l) * (1 - delta1r)
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 - 1, b1 ] += area
* outData[b0 - 1, b1 ] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
279: outCount[b0 - 1, b1 ] += area
/* "histogram.pyx":279
* area = (-delta0l) * (1 - delta1r)
* rest -= area
* outCount[b0 - 1, b1 ] += area # <<<<<<<<<<<<<<
* outData[b0 - 1, b1 ] += area * d
*
*/
__pyx_t_43 = (__pyx_v_b0 - 1);
__pyx_t_44 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_43, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_44, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
280: outData[b0 - 1, b1 ] += area * d
/* "histogram.pyx":280
* rest -= area
* outCount[b0 - 1, b1 ] += area
* outData[b0 - 1, b1 ] += area * d # <<<<<<<<<<<<<<
*
* area = (1 + delta0l) * (delta1r)
*/
__pyx_t_45 = (__pyx_v_b0 - 1);
__pyx_t_46 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_45, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_46, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
281:
282: area = (1 + delta0l) * (delta1r)
/* "histogram.pyx":282
* outData[b0 - 1, b1 ] += area * d
*
* area = (1 + delta0l) * (delta1r) # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 , b1 + 1 ] += area
*/
__pyx_v_area = ((1.0 + __pyx_v_delta0l) * __pyx_v_delta1r);
283: rest -= area
/* "histogram.pyx":283
*
* area = (1 + delta0l) * (delta1r)
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 , b1 + 1 ] += area
* outData[b0 , b1 + 1 ] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
284: outCount[b0 , b1 + 1 ] += area
/* "histogram.pyx":284
* area = (1 + delta0l) * (delta1r)
* rest -= area
* outCount[b0 , b1 + 1 ] += area # <<<<<<<<<<<<<<
* outData[b0 , b1 + 1 ] += area * d
* elif delta0r > 0 and b0 < bin0 - 1:
*/
__pyx_t_47 = __pyx_v_b0;
__pyx_t_48 = (__pyx_v_b1 + 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_47, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_48, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
285: outData[b0 , b1 + 1 ] += area * d
/* "histogram.pyx":285
* rest -= area
* outCount[b0 , b1 + 1 ] += area
* outData[b0 , b1 + 1 ] += area * d # <<<<<<<<<<<<<<
* elif delta0r > 0 and b0 < bin0 - 1:
* if delta1l < 0 and b1 > 0:
*/
__pyx_t_49 = __pyx_v_b0;
__pyx_t_50 = (__pyx_v_b1 + 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_49, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_50, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
goto __pyx_L28;
}
__pyx_L28:;
goto __pyx_L27;
}
286: elif delta0r > 0 and b0 < bin0 - 1:
/* "histogram.pyx":286
* outCount[b0 , b1 + 1 ] += area
* outData[b0 , b1 + 1 ] += area * d
* elif delta0r > 0 and b0 < bin0 - 1: # <<<<<<<<<<<<<<
* if delta1l < 0 and b1 > 0:
* area = -delta0r * delta1l
*/
__pyx_t_23 = (__pyx_v_delta0r > 0.0);
if (__pyx_t_23) {
__pyx_t_4 = (__pyx_v_b0 < (__pyx_v_bin0 - 1));
__pyx_t_22 = __pyx_t_4;
} else {
__pyx_t_22 = __pyx_t_23;
}
if (__pyx_t_22) {
287: if delta1l < 0 and b1 > 0:
/* "histogram.pyx":287
* outData[b0 , b1 + 1 ] += area * d
* elif delta0r > 0 and b0 < bin0 - 1:
* if delta1l < 0 and b1 > 0: # <<<<<<<<<<<<<<
* area = -delta0r * delta1l
* rest -= area
*/
__pyx_t_22 = (__pyx_v_delta1l < 0.0);
if (__pyx_t_22) {
__pyx_t_23 = (__pyx_v_b1 > 0);
__pyx_t_4 = __pyx_t_23;
} else {
__pyx_t_4 = __pyx_t_22;
}
if (__pyx_t_4) {
288: area = -delta0r * delta1l
/* "histogram.pyx":288
* elif delta0r > 0 and b0 < bin0 - 1:
* if delta1l < 0 and b1 > 0:
* area = -delta0r * delta1l # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 + 1, b1 - 1] += area
*/
__pyx_v_area = ((-__pyx_v_delta0r) * __pyx_v_delta1l);
289: rest -= area
/* "histogram.pyx":289
* if delta1l < 0 and b1 > 0:
* area = -delta0r * delta1l
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 + 1, b1 - 1] += area
* outData[b0 + 1, b1 - 1] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
290: outCount[b0 + 1, b1 - 1] += area
/* "histogram.pyx":290
* area = -delta0r * delta1l
* rest -= area
* outCount[b0 + 1, b1 - 1] += area # <<<<<<<<<<<<<<
* outData[b0 + 1, b1 - 1] += area * d
*
*/
__pyx_t_51 = (__pyx_v_b0 + 1);
__pyx_t_52 = (__pyx_v_b1 - 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_51, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_52, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
291: outData[b0 + 1, b1 - 1] += area * d
/* "histogram.pyx":291
* rest -= area
* outCount[b0 + 1, b1 - 1] += area
* outData[b0 + 1, b1 - 1] += area * d # <<<<<<<<<<<<<<
*
* area = (delta0r) * (1 + delta1l)
*/
__pyx_t_53 = (__pyx_v_b0 + 1);
__pyx_t_54 = (__pyx_v_b1 - 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_53, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_54, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
292:
293: area = (delta0r) * (1 + delta1l)
/* "histogram.pyx":293
* outData[b0 + 1, b1 - 1] += area * d
*
* area = (delta0r) * (1 + delta1l) # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 + 1, b1 ] += area
*/
__pyx_v_area = (__pyx_v_delta0r * (1.0 + __pyx_v_delta1l));
294: rest -= area
/* "histogram.pyx":294
*
* area = (delta0r) * (1 + delta1l)
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 + 1, b1 ] += area
* outData[b0 + 1, b1 ] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
295: outCount[b0 + 1, b1 ] += area
/* "histogram.pyx":295
* area = (delta0r) * (1 + delta1l)
* rest -= area
* outCount[b0 + 1, b1 ] += area # <<<<<<<<<<<<<<
* outData[b0 + 1, b1 ] += area * d
*
*/
__pyx_t_55 = (__pyx_v_b0 + 1);
__pyx_t_56 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_55, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_56, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
296: outData[b0 + 1, b1 ] += area * d
/* "histogram.pyx":296
* rest -= area
* outCount[b0 + 1, b1 ] += area
* outData[b0 + 1, b1 ] += area * d # <<<<<<<<<<<<<<
*
* area = (1 - delta0r) * (-delta1l)
*/
__pyx_t_57 = (__pyx_v_b0 + 1);
__pyx_t_58 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_57, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_58, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
297:
298: area = (1 - delta0r) * (-delta1l)
/* "histogram.pyx":298
* outData[b0 + 1, b1 ] += area * d
*
* area = (1 - delta0r) * (-delta1l) # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 , b1 - 1 ] += area
*/
__pyx_v_area = ((1.0 - __pyx_v_delta0r) * (-__pyx_v_delta1l));
299: rest -= area
/* "histogram.pyx":299
*
* area = (1 - delta0r) * (-delta1l)
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 , b1 - 1 ] += area
* outData[b0 , b1 - 1 ] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
300: outCount[b0 , b1 - 1 ] += area
/* "histogram.pyx":300
* area = (1 - delta0r) * (-delta1l)
* rest -= area
* outCount[b0 , b1 - 1 ] += area # <<<<<<<<<<<<<<
* outData[b0 , b1 - 1 ] += area * d
*
*/
__pyx_t_59 = __pyx_v_b0;
__pyx_t_60 = (__pyx_v_b1 - 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_59, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_60, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
301: outData[b0 , b1 - 1 ] += area * d
/* "histogram.pyx":301
* rest -= area
* outCount[b0 , b1 - 1 ] += area
* outData[b0 , b1 - 1 ] += area * d # <<<<<<<<<<<<<<
*
* elif delta1r > 0 and b1 < bin1 - 1:
*/
__pyx_t_61 = __pyx_v_b0;
__pyx_t_62 = (__pyx_v_b1 - 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_61, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_62, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
goto __pyx_L29;
}
302:
303: elif delta1r > 0 and b1 < bin1 - 1:
/* "histogram.pyx":303
* outData[b0 , b1 - 1 ] += area * d
*
* elif delta1r > 0 and b1 < bin1 - 1: # <<<<<<<<<<<<<<
* area = delta0r * delta1r
* rest -= area
*/
__pyx_t_4 = (__pyx_v_delta1r > 0.0);
if (__pyx_t_4) {
__pyx_t_22 = (__pyx_v_b1 < (__pyx_v_bin1 - 1));
__pyx_t_23 = __pyx_t_22;
} else {
__pyx_t_23 = __pyx_t_4;
}
if (__pyx_t_23) {
304: area = delta0r * delta1r
/* "histogram.pyx":304
*
* elif delta1r > 0 and b1 < bin1 - 1:
* area = delta0r * delta1r # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 + 1, b1 + 1] += area
*/
__pyx_v_area = (__pyx_v_delta0r * __pyx_v_delta1r);
305: rest -= area
/* "histogram.pyx":305
* elif delta1r > 0 and b1 < bin1 - 1:
* area = delta0r * delta1r
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 + 1, b1 + 1] += area
* outData[b0 + 1, b1 + 1] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
306: outCount[b0 + 1, b1 + 1] += area
/* "histogram.pyx":306
* area = delta0r * delta1r
* rest -= area
* outCount[b0 + 1, b1 + 1] += area # <<<<<<<<<<<<<<
* outData[b0 + 1, b1 + 1] += area * d
*
*/
__pyx_t_63 = (__pyx_v_b0 + 1);
__pyx_t_64 = (__pyx_v_b1 + 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_63, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_64, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
307: outData[b0 + 1, b1 + 1] += area * d
/* "histogram.pyx":307
* rest -= area
* outCount[b0 + 1, b1 + 1] += area
* outData[b0 + 1, b1 + 1] += area * d # <<<<<<<<<<<<<<
*
* area = (delta0r) * (1 - delta1r)
*/
__pyx_t_65 = (__pyx_v_b0 + 1);
__pyx_t_66 = (__pyx_v_b1 + 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_65, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_66, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
308:
309: area = (delta0r) * (1 - delta1r)
/* "histogram.pyx":309
* outData[b0 + 1, b1 + 1] += area * d
*
* area = (delta0r) * (1 - delta1r) # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 + 1, b1 ] += area
*/
__pyx_v_area = (__pyx_v_delta0r * (1.0 - __pyx_v_delta1r));
310: rest -= area
/* "histogram.pyx":310
*
* area = (delta0r) * (1 - delta1r)
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 + 1, b1 ] += area
* outData[b0 + 1, b1 ] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
311: outCount[b0 + 1, b1 ] += area
/* "histogram.pyx":311
* area = (delta0r) * (1 - delta1r)
* rest -= area
* outCount[b0 + 1, b1 ] += area # <<<<<<<<<<<<<<
* outData[b0 + 1, b1 ] += area * d
*
*/
__pyx_t_67 = (__pyx_v_b0 + 1);
__pyx_t_68 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_67, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_68, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
312: outData[b0 + 1, b1 ] += area * d
/* "histogram.pyx":312
* rest -= area
* outCount[b0 + 1, b1 ] += area
* outData[b0 + 1, b1 ] += area * d # <<<<<<<<<<<<<<
*
* area = (1 - delta0r) * (delta1r)
*/
__pyx_t_69 = (__pyx_v_b0 + 1);
__pyx_t_70 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_69, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_70, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
313:
314: area = (1 - delta0r) * (delta1r)
/* "histogram.pyx":314
* outData[b0 + 1, b1 ] += area * d
*
* area = (1 - delta0r) * (delta1r) # <<<<<<<<<<<<<<
* rest -= area
* outCount[b0 , b1 + 1 ] += area
*/
__pyx_v_area = ((1.0 - __pyx_v_delta0r) * __pyx_v_delta1r);
315: rest -= area
/* "histogram.pyx":315
*
* area = (1 - delta0r) * (delta1r)
* rest -= area # <<<<<<<<<<<<<<
* outCount[b0 , b1 + 1 ] += area
* outData[b0 , b1 + 1 ] += area * d
*/
__pyx_v_rest = (__pyx_v_rest - __pyx_v_area);
316: outCount[b0 , b1 + 1 ] += area
/* "histogram.pyx":316
* area = (1 - delta0r) * (delta1r)
* rest -= area
* outCount[b0 , b1 + 1 ] += area # <<<<<<<<<<<<<<
* outData[b0 , b1 + 1 ] += area * d
* outCount[b0, b1] += rest
*/
__pyx_t_71 = __pyx_v_b0;
__pyx_t_72 = (__pyx_v_b1 + 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_71, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_72, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_area;
317: outData[b0 , b1 + 1 ] += area * d
/* "histogram.pyx":317
* rest -= area
* outCount[b0 , b1 + 1 ] += area
* outData[b0 , b1 + 1 ] += area * d # <<<<<<<<<<<<<<
* outCount[b0, b1] += rest
* outData[b0, b1] += d * rest
*/
__pyx_t_73 = __pyx_v_b0;
__pyx_t_74 = (__pyx_v_b1 + 1);
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_73, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_74, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_area * __pyx_v_d);
goto __pyx_L29;
}
__pyx_L29:;
goto __pyx_L27;
}
__pyx_L27:;
goto __pyx_L26;
}
__pyx_L26:;
318: outCount[b0, b1] += rest
/* "histogram.pyx":318
* outCount[b0 , b1 + 1 ] += area
* outData[b0 , b1 + 1 ] += area * d
* outCount[b0, b1] += rest # <<<<<<<<<<<<<<
* outData[b0, b1] += d * rest
*
*/
__pyx_t_75 = __pyx_v_b0;
__pyx_t_76 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_75, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_76, __pyx_pybuffernd_outCount.diminfo[1].strides) += __pyx_v_rest;
319: outData[b0, b1] += d * rest
/* "histogram.pyx":319
* outData[b0 , b1 + 1 ] += area * d
* outCount[b0, b1] += rest
* outData[b0, b1] += d * rest # <<<<<<<<<<<<<<
*
* for i in prange(bin0):
*/
__pyx_t_77 = __pyx_v_b0;
__pyx_t_78 = __pyx_v_b1;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_77, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_78, __pyx_pybuffernd_outData.diminfo[1].strides) += (__pyx_v_d * __pyx_v_rest);
}
320:
321: for i in prange(bin0):
/* "histogram.pyx":321
* outData[b0, b1] += d * rest
*
* for i in prange(bin0): # <<<<<<<<<<<<<<
* for j in range(bin1):
* if outCount[i, j] > epsilon:
*/
__pyx_t_11 = __pyx_v_bin0;
if (1 == 0) abort();
{
#if ((defined(__APPLE__) || defined(__OSX__)) && (defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95)))))
#undef likely
#undef unlikely
#define likely(x) (x)
#define unlikely(x) (x)
#endif
__pyx_t_79 = (__pyx_t_11 - 0) / 1;
if (__pyx_t_79 > 0)
{
#ifdef _OPENMP
#pragma omp parallel
#endif /* _OPENMP */
{
#ifdef _OPENMP
#pragma omp for lastprivate(__pyx_v_j) firstprivate(__pyx_v_i) lastprivate(__pyx_v_i)
#endif /* _OPENMP */
for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_79; __pyx_t_5++){
{
__pyx_v_i = 0 + 1 * __pyx_t_5;
/* Initialize private variables to invalid values */
__pyx_v_j = ((long)0xbad0bad0);
322: for j in range(bin1):
/* "histogram.pyx":322
*
* for i in prange(bin0):
* for j in range(bin1): # <<<<<<<<<<<<<<
* if outCount[i, j] > epsilon:
* outMerge[i, j] += outData[i, j] / outCount[i, j]
*/
__pyx_t_80 = __pyx_v_bin1;
for (__pyx_t_81 = 0; __pyx_t_81 < __pyx_t_80; __pyx_t_81+=1) {
__pyx_v_j = __pyx_t_81;
323: if outCount[i, j] > epsilon:
/* "histogram.pyx":323
* for i in prange(bin0):
* for j in range(bin1):
* if outCount[i, j] > epsilon: # <<<<<<<<<<<<<<
* outMerge[i, j] += outData[i, j] / outCount[i, j]
* else:
*/
__pyx_t_82 = __pyx_v_i;
__pyx_t_83 = __pyx_v_j;
__pyx_t_23 = ((*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_82, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_83, __pyx_pybuffernd_outCount.diminfo[1].strides)) > __pyx_v_epsilon);
if (__pyx_t_23) {
324: outMerge[i, j] += outData[i, j] / outCount[i, j]
/* "histogram.pyx":324
* for j in range(bin1):
* if outCount[i, j] > epsilon:
* outMerge[i, j] += outData[i, j] / outCount[i, j] # <<<<<<<<<<<<<<
* else:
* outMerge[i, j] += dummy
*/
__pyx_t_84 = __pyx_v_i;
__pyx_t_85 = __pyx_v_j;
__pyx_t_86 = __pyx_v_i;
__pyx_t_87 = __pyx_v_j;
__pyx_t_88 = __pyx_v_i;
__pyx_t_89 = __pyx_v_j;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outMerge.rcbuffer->pybuffer.buf, __pyx_t_88, __pyx_pybuffernd_outMerge.diminfo[0].strides, __pyx_t_89, __pyx_pybuffernd_outMerge.diminfo[1].strides) += ((*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outData.rcbuffer->pybuffer.buf, __pyx_t_84, __pyx_pybuffernd_outData.diminfo[0].strides, __pyx_t_85, __pyx_pybuffernd_outData.diminfo[1].strides)) / (*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outCount.rcbuffer->pybuffer.buf, __pyx_t_86, __pyx_pybuffernd_outCount.diminfo[0].strides, __pyx_t_87, __pyx_pybuffernd_outCount.diminfo[1].strides)));
goto __pyx_L36;
}
/*else*/ {
325: else:
326: outMerge[i, j] += dummy
/* "histogram.pyx":326
* outMerge[i, j] += outData[i, j] / outCount[i, j]
* else:
* outMerge[i, j] += dummy # <<<<<<<<<<<<<<
*
*
*/
__pyx_t_90 = __pyx_v_i;
__pyx_t_91 = __pyx_v_j;
*__Pyx_BufPtrStrided2d(__pyx_t_5numpy_float64_t *, __pyx_pybuffernd_outMerge.rcbuffer->pybuffer.buf, __pyx_t_90, __pyx_pybuffernd_outMerge.diminfo[0].strides, __pyx_t_91, __pyx_pybuffernd_outMerge.diminfo[1].strides) += __pyx_v_dummy;
}
__pyx_L36:;
}
}
}
}
}
}
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#undef unlikely
#define likely(x) __builtin_expect(!!(x), 1)
#define unlikely(x) __builtin_expect(!!(x), 0)
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327:
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